Analysis of interatomic Contacts of Structural Units in PDB entry:
2JBT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JBT entry

There are 4 chains in PDB entry 2JBT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 23VAL 422
B
 ARG 24VAL 422
C
 ARG 24VAL 422
D
 ARG 24VAL 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 2JBT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 62Right-handed alpha
Helix 2
2
A
65 76Right-handed alpha
Helix 3
3
A
77 80Right-handed 310
Helix 4
4
A
83 87Right-handed 310
Helix 5
5
A
92 107Right-handed alpha
Helix 6
6
A
107 125Right-handed alpha
Helix 7
7
A
128 137Right-handed alpha
Helix 8
8
A
172 176Right-handed 310
Helix 9
9
A
202 204Right-handed 310
Helix 10
10
A
215 219Right-handed 310
Helix 11
11
A
238 243Right-handed alpha
Helix 12
12
A
261 267Right-handed alpha
Helix 13
13
A
268 290Right-handed alpha
Helix 14
14
A
304 338Right-handed alpha
Helix 15
15
A
343 370Right-handed alpha
Helix 16
16
A
373 377Right-handed 310
Helix 17
17
A
381 394Right-handed alpha
Helix 18
18
A
400 413Right-handed alpha
Helix 19
19
B
39 62Right-handed alpha
Helix 20
20
B
65 76Right-handed alpha
Helix 21
21
B
77 80Right-handed 310
Helix 22
22
B
83 87Right-handed 310
Helix 23
23
B
92 107Right-handed alpha
Helix 24
24
B
107 125Right-handed alpha
Helix 25
25
B
128 137Right-handed alpha
Helix 26
26
B
172 176Right-handed 310
Helix 27
27
B
202 204Right-handed 310
Helix 28
28
B
215 219Right-handed 310
Helix 29
29
B
238 243Right-handed alpha
Helix 30
30
B
261 267Right-handed alpha
Helix 31
31
B
268 290Right-handed alpha
Helix 32
32
B
304 338Right-handed alpha
Helix 33
33
B
343 370Right-handed alpha
Helix 34
34
B
373 377Right-handed 310
Helix 35
35
B
381 394Right-handed alpha
Helix 36
36
B
400 413Right-handed alpha
Helix 37
37
C
39 62Right-handed alpha
Helix 38
38
C
65 76Right-handed alpha
Helix 39
39
C
77 80Right-handed 310
Helix 40
40
C
83 87Right-handed 310
Helix 41
41
C
92 107Right-handed alpha
Helix 42
42
C
107 125Right-handed alpha
Helix 43
43
C
128 137Right-handed alpha
Helix 44
44
C
172 176Right-handed 310
Helix 45
45
C
202 204Right-handed 310
Helix 46
46
C
215 219Right-handed 310
Helix 47
47
C
238 243Right-handed alpha
Helix 48
48
C
261 267Right-handed alpha
Helix 49
49
C
268 290Right-handed alpha
Helix 50
50
C
304 338Right-handed alpha
Helix 51
51
C
343 370Right-handed alpha
Helix 52
52
C
373 377Right-handed 310
Helix 53
53
C
381 394Right-handed alpha
Helix 54
54
C
400 413Right-handed alpha
Helix 55
55
D
39 62Right-handed alpha
Helix 56
56
D
65 76Right-handed alpha
Helix 57
57
D
77 80Right-handed 310
Helix 58
58
D
83 87Right-handed 310
Helix 59
59
D
92 107Right-handed alpha
Helix 60
60
D
107 125Right-handed alpha
Helix 61
61
D
128 137Right-handed alpha
Helix 62
62
D
172 176Right-handed 310
Helix 63
63
D
202 204Right-handed 310
Helix 64
64
D
215 219Right-handed 310
Helix 65
65
D
238 243Right-handed alpha
Helix 66
66
D
261 267Right-handed alpha
Helix 67
67
D
268 290Right-handed alpha
Helix 68
68
D
304 338Right-handed alpha
Helix 69
69
D
343 370Right-handed alpha
Helix 70
70
D
373 377Right-handed 310
Helix 71
71
D
381 394Right-handed alpha
Helix 72
72
D
400 413Right-handed alpha
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There are 8 sheets in PDB entry 2JBT. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
178 186parallel
Strand 3
A
192 200anti-parallel
Strand 4
A
235 237anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 157first strand
Strand 2
A
160 170anti-parallel
Strand 3
A
221 231anti-parallel
Strand 4
A
205 207anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
178 185parallel
Strand 3
B
193 200anti-parallel
Strand 4
B
235 237anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 157first strand
Strand 2
B
160 170anti-parallel
Strand 3
B
221 231anti-parallel
Strand 4
B
205 207anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 147first strand
Strand 2
C
178 185parallel
Strand 3
C
193 200anti-parallel
Strand 4
C
235 237anti-parallel
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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
153 157first strand
Strand 2
C
160 170anti-parallel
Strand 3
C
221 231anti-parallel
Strand 4
C
205 207anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
144 147first strand
Strand 2
D
178 186parallel
Strand 3
D
192 200anti-parallel
Strand 4
D
235 237anti-parallel
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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
153 157first strand
Strand 2
D
160 170anti-parallel
Strand 3
D
221 231anti-parallel
Strand 4
D
205 207anti-parallel
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