Analysis of interatomic Contacts of Structural Units in PDB entry:
2JC3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JC3 entry

There are 8 chains in PDB entry 2JC3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 294
B
 MET 1GLU 294
C
 MET 1GLU 294
D
 MET 1GLU 294
E
 MET 1GLU 294
F
 MET 1GLU 294
G
 MET 1GLU 294
H
 MET 1GLU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 2JC3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 8Right-handed 310
Helix 2
2
A
33 35Right-handed 310
Helix 3
3
A
40 55Right-handed alpha
Helix 4
4
A
70 84Right-handed alpha
Helix 5
5
A
96 105Right-handed alpha
Helix 6
6
A
117 133Right-handed alpha
Helix 7
7
A
144 153Right-handed alpha
Helix 8
8
A
153 162Right-handed alpha
Helix 9
9
A
176 188Right-handed alpha
Helix 10
10
A
222 226Right-handed 310
Helix 11
11
A
233 249Right-handed alpha
Helix 12
12
A
253 270Right-handed alpha
Helix 13
13
A
283 290Right-handed 310
Helix 14
14
B
3 8Right-handed 310
Helix 15
15
B
33 35Right-handed 310
Helix 16
16
B
40 55Right-handed alpha
Helix 17
17
B
70 84Right-handed alpha
Helix 18
18
B
96 105Right-handed alpha
Helix 19
19
B
117 132Right-handed alpha
Helix 20
20
B
144 153Right-handed alpha
Helix 21
21
B
153 162Right-handed alpha
Helix 22
22
B
176 188Right-handed alpha
Helix 23
23
B
222 226Right-handed 310
Helix 24
24
B
233 249Right-handed alpha
Helix 25
25
B
253 270Right-handed alpha
Helix 26
26
B
283 290Right-handed 310
Helix 27
27
C
3 8Right-handed 310
Helix 28
28
C
33 35Right-handed 310
Helix 29
29
C
40 55Right-handed alpha
Helix 30
30
C
70 84Right-handed alpha
Helix 31
31
C
96 105Right-handed alpha
Helix 32
32
C
117 132Right-handed alpha
Helix 33
33
C
144 153Right-handed alpha
Helix 34
34
C
153 162Right-handed alpha
Helix 35
35
C
176 188Right-handed alpha
Helix 36
36
C
222 226Right-handed 310
Helix 37
37
C
233 249Right-handed alpha
Helix 38
38
C
253 270Right-handed alpha
Helix 39
39
C
283 290Right-handed 310
Helix 40
40
D
3 8Right-handed 310
Helix 41
41
D
33 35Right-handed 310
Helix 42
42
D
40 55Right-handed alpha
Helix 43
43
D
70 84Right-handed alpha
Helix 44
44
D
96 105Right-handed alpha
Helix 45
45
D
117 132Right-handed alpha
Helix 46
46
D
144 153Right-handed alpha
Helix 47
47
D
153 162Right-handed alpha
Helix 48
48
D
176 188Right-handed alpha
Helix 49
49
D
222 226Right-handed 310
Helix 50
50
D
233 248Right-handed alpha
Helix 51
51
D
253 270Right-handed alpha
Helix 52
52
D
283 290Right-handed 310
Helix 53
53
E
3 8Right-handed 310
Helix 54
54
E
33 35Right-handed 310
Helix 55
55
E
40 55Right-handed alpha
Helix 56
56
E
70 84Right-handed alpha
Helix 57
57
E
96 105Right-handed alpha
Helix 58
58
E
117 132Right-handed alpha
Helix 59
59
E
144 153Right-handed alpha
Helix 60
60
E
153 162Right-handed alpha
Helix 61
61
E
176 188Right-handed alpha
Helix 62
62
E
222 226Right-handed 310
Helix 63
63
E
233 249Right-handed alpha
Helix 64
64
E
253 270Right-handed alpha
Helix 65
65
E
283 290Right-handed 310
Helix 66
66
F
3 8Right-handed 310
Helix 67
67
F
33 35Right-handed 310
Helix 68
68
F
40 55Right-handed alpha
Helix 69
69
F
70 84Right-handed alpha
Helix 70
70
F
96 105Right-handed alpha
Helix 71
71
F
117 132Right-handed alpha
Helix 72
72
F
144 153Right-handed alpha
Helix 73
73
F
153 162Right-handed alpha
Helix 74
74
F
176 188Right-handed alpha
Helix 75
75
F
222 226Right-handed 310
Helix 76
76
F
233 249Right-handed alpha
Helix 77
77
F
253 270Right-handed alpha
Helix 78
78
F
283 290Right-handed 310
Helix 79
79
G
3 8Right-handed 310
Helix 80
80
G
33 35Right-handed 310
Helix 81
81
G
40 54Right-handed alpha
Helix 82
82
G
70 84Right-handed alpha
Helix 83
83
G
96 105Right-handed alpha
Helix 84
84
G
117 133Right-handed alpha
Helix 85
85
G
144 153Right-handed alpha
Helix 86
86
G
153 162Right-handed alpha
Helix 87
87
G
176 188Right-handed alpha
Helix 88
88
G
222 226Right-handed 310
Helix 89
89
G
233 249Right-handed alpha
Helix 90
90
G
253 270Right-handed alpha
Helix 91
91
G
283 290Right-handed 310
Helix 92
92
H
3 8Right-handed 310
Helix 93
93
H
33 35Right-handed 310
Helix 94
94
H
40 55Right-handed alpha
Helix 95
95
H
70 84Right-handed alpha
Helix 96
96
H
96 105Right-handed alpha
Helix 97
97
H
117 132Right-handed alpha
Helix 98
98
H
144 153Right-handed alpha
Helix 99
99
H
153 162Right-handed alpha
Helix 100
100
H
176 188Right-handed alpha
Helix 101
101
H
222 226Right-handed 310
Helix 102
102
H
233 249Right-handed alpha
Helix 103
103
H
253 270Right-handed alpha
Helix 104
104
H
283 290Right-handed 310
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There are 16 sheets in PDB entry 2JC3. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, EA, EB, FA, FB, GA, GB, HA, HB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
274 279parallel
Strand 4
A
168 172parallel
Strand 5
A
194 200parallel
Strand 6
A
228 232parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 113first strand
Strand 2
A
86 92parallel
Strand 3
A
63 67parallel
Strand 4
A
136 137parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
26 31anti-parallel
Strand 3
B
274 279parallel
Strand 4
B
168 172parallel
Strand 5
B
194 200parallel
Strand 6
B
228 232parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 113first strand
Strand 2
B
86 92parallel
Strand 3
B
63 67parallel
Strand 4
B
136 137parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 15first strand
Strand 2
C
26 31anti-parallel
Strand 3
C
274 279parallel
Strand 4
C
168 172parallel
Strand 5
C
194 200parallel
Strand 6
C
228 232parallel
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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 113first strand
Strand 2
C
86 92parallel
Strand 3
C
63 67parallel
Strand 4
C
136 137parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
13 15first strand
Strand 2
D
26 31anti-parallel
Strand 3
D
274 279parallel
Strand 4
D
168 172parallel
Strand 5
D
194 200parallel
Strand 6
D
228 232parallel
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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
109 113first strand
Strand 2
D
86 92parallel
Strand 3
D
63 67parallel
Strand 4
D
136 137parallel
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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 15first strand
Strand 2
E
26 31anti-parallel
Strand 3
E
274 279parallel
Strand 4
E
168 172parallel
Strand 5
E
194 200parallel
Strand 6
E
228 232parallel
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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
109 113first strand
Strand 2
E
86 92parallel
Strand 3
E
63 67parallel
Strand 4
E
136 137parallel
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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
13 15first strand
Strand 2
F
26 31anti-parallel
Strand 3
F
274 279parallel
Strand 4
F
168 172parallel
Strand 5
F
194 200parallel
Strand 6
F
228 232parallel
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There are 4 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
109 113first strand
Strand 2
F
86 92parallel
Strand 3
F
63 67parallel
Strand 4
F
136 137parallel
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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
13 15first strand
Strand 2
G
26 31anti-parallel
Strand 3
G
274 279parallel
Strand 4
G
168 172parallel
Strand 5
G
194 200parallel
Strand 6
G
228 232parallel
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There are 4 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
109 113first strand
Strand 2
G
86 92parallel
Strand 3
G
63 67parallel
Strand 4
G
136 137parallel
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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
13 15first strand
Strand 2
H
26 31anti-parallel
Strand 3
H
274 279parallel
Strand 4
H
168 172parallel
Strand 5
H
194 200parallel
Strand 6
H
228 232parallel
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There are 4 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
109 113first strand
Strand 2
H
86 92parallel
Strand 3
H
63 67parallel
Strand 4
H
136 137parallel
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