Analysis of interatomic Contacts of Structural Units in PDB entry:
2JCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JCS entry

There are 2 chains in PDB entry 2JCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12LEU 209
B
 THR 12LEU 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2JCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 38Right-handed alpha
Helix 2
2
A
39 44Right-handed 310
Helix 3
3
A
53 58Right-handed alpha
Helix 4
4
A
64 72Right-handed alpha
Helix 5
5
A
72 93Right-handed alpha
Helix 6
6
A
106 113Right-handed alpha
Helix 7
7
A
113 121Right-handed alpha
Helix 8
8
A
125 143Right-handed alpha
Helix 9
9
A
156 168Right-handed alpha
Helix 10
10
A
169 173Right-handed 310
Helix 11
11
A
176 192Right-handed alpha
Helix 12
12
B
32 38Right-handed alpha
Helix 13
13
B
39 44Right-handed 310
Helix 14
14
B
53 58Right-handed alpha
Helix 15
15
B
64 72Right-handed alpha
Helix 16
16
B
72 93Right-handed alpha
Helix 17
17
B
106 113Right-handed alpha
Helix 18
18
B
113 121Right-handed alpha
Helix 19
19
B
125 143Right-handed alpha
Helix 20
20
B
156 168Right-handed alpha
Helix 21
21
B
169 173Right-handed 310
Helix 22
22
B
176 192Right-handed alpha
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There are 2 sheets in PDB entry 2JCS. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
100 104parallel
Strand 3
A
21 26parallel
Strand 4
A
149 154parallel
Strand 5
A
201 206parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
100 104parallel
Strand 3
B
21 26parallel
Strand 4
B
149 154parallel
Strand 5
B
201 206parallel
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