Analysis of interatomic Contacts of Structural Units in PDB entry:
2JEO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JEO entry

There is 1 chain in PDB entry 2JEO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 21ILE 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2JEO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 47Right-handed alpha
Helix 2
2
A
48 52Right-handed 310
Helix 3
3
A
53 57Right-handed 310
Helix 4
4
A
65 67Right-handed 310
Helix 5
5
A
72 81Right-handed alpha
Helix 6
6
A
88 91Right-handed 310
Helix 7
7
A
93 106Right-handed alpha
Helix 8
8
A
145 150Right-handed alpha
Helix 9
9
A
161 174Right-handed alpha
Helix 10
10
A
179 190Right-handed alpha
Helix 11
11
A
190 199Right-handed alpha
Helix 12
12
A
200 206Right-handed 310
Helix 13
13
A
216 233Right-handed alpha
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There are 3 sheets in PDB entry 2JEO. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
134 138parallel
Strand 3
A
24 29parallel
Strand 4
A
154 159parallel
Strand 5
A
208 211parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
127 129anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
121 123anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il