Analysis of interatomic Contacts of Structural Units in PDB entry:
2JG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JG5 entry

There are 2 chains in PDB entry 2JG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 306
B
 MET 1GLU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2JG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 49Right-handed alpha
Helix 2
2
A
60 74Right-handed alpha
Helix 3
3
A
109 121Right-handed alpha
Helix 4
4
A
142 155Right-handed alpha
Helix 5
5
A
163 171Right-handed alpha
Helix 6
6
A
172 174Right-handed 310
Helix 7
7
A
181 189Right-handed alpha
Helix 8
8
A
195 209Right-handed alpha
Helix 9
9
A
219 221Right-handed 310
Helix 10
10
A
246 261Right-handed alpha
Helix 11
11
A
264 281Right-handed alpha
Helix 12
12
A
287 296Right-handed alpha
Helix 13
13
B
37 49Right-handed alpha
Helix 14
14
B
61 74Right-handed alpha
Helix 15
15
B
109 122Right-handed alpha
Helix 16
16
B
142 155Right-handed alpha
Helix 17
17
B
163 171Right-handed alpha
Helix 18
18
B
172 174Right-handed 310
Helix 19
19
B
181 190Right-handed alpha
Helix 20
20
B
195 209Right-handed alpha
Helix 21
21
B
219 221Right-handed 310
Helix 22
22
B
246 261Right-handed alpha
Helix 23
23
B
264 282Right-handed alpha
Helix 24
24
B
287 298Right-handed alpha
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There are 7 sheets in PDB entry 2JG5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
54 59parallel
Strand 3
A
2 6parallel
Strand 4
A
128 132parallel
Strand 5
A
157 161parallel
Strand 6
A
177 178parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
54 59parallel
Strand 3
A
81 82parallel
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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 27first strand
Strand 2
B
99 102parallel
Strand 3
B
88 93anti-parallel
Strand 4
B
10 17parallel
Strand 5
B
25 36anti-parallel
Strand 6
A
98 102parallel
Strand 7
A
88 94anti-parallel
Strand 8
A
10 16parallel
Strand 9
A
30 36anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
223 226anti-parallel
Strand 3
A
230 235anti-parallel
Strand 4
A
299 305anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 78first strand
Strand 2
B
54 60parallel
Strand 3
B
2 6parallel
Strand 4
B
128 132parallel
Strand 5
B
157 161parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 78first strand
Strand 2
B
54 60parallel
Strand 3
B
81 83parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 217first strand
Strand 2
B
223 226anti-parallel
Strand 3
B
230 235anti-parallel
Strand 4
B
299 305anti-parallel
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