Analysis of interatomic Contacts of Structural Units in PDB entry:
2JHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JHE entry

There are 4 chains in PDB entry 2JHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 190
B
 MET 1ARG 190
C
 MET 1MET 188
D
 MET 1ARG 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2JHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
47 61Right-handed alpha
Helix 3
3
A
76 89Right-handed alpha
Helix 4
4
A
106 114Right-handed alpha
Helix 5
5
A
116 121Right-handed alpha
Helix 6
6
A
125 128Right-handed 310
Helix 7
7
A
133 140Right-handed alpha
Helix 8
8
A
178 186Right-handed alpha
Helix 9
9
B
12 24Right-handed alpha
Helix 10
10
B
47 60Right-handed alpha
Helix 11
11
B
73 89Right-handed alpha
Helix 12
12
B
106 114Right-handed alpha
Helix 13
13
B
116 121Right-handed alpha
Helix 14
14
B
125 128Right-handed 310
Helix 15
15
B
133 139Right-handed alpha
Helix 16
16
B
178 188Right-handed alpha
Helix 17
17
C
12 24Right-handed alpha
Helix 18
18
C
47 59Right-handed alpha
Helix 19
19
C
80 89Right-handed alpha
Helix 20
20
C
106 114Right-handed alpha
Helix 21
21
C
116 121Right-handed alpha
Helix 22
22
C
125 128Right-handed 310
Helix 23
23
C
133 140Right-handed alpha
Helix 24
24
C
178 187Right-handed alpha
Helix 25
25
D
12 23Right-handed alpha
Helix 26
26
D
50 60Right-handed alpha
Helix 27
27
D
73 87Right-handed alpha
Helix 28
28
D
106 114Right-handed alpha
Helix 29
29
D
116 121Right-handed alpha
Helix 30
30
D
133 139Right-handed alpha
Helix 31
31
D
178 189Right-handed alpha
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There are 6 sheets in PDB entry 2JHE. Click on sheet of interest to get list of strands forming it: AA, AB, BA, CA, CB, A,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 70first strand
Strand 2
A
2 7anti-parallel
Strand 3
A
38 43anti-parallel
Strand 4
A
28 34anti-parallel
Strand 5
B
28 34anti-parallel
Strand 6
B
38 43anti-parallel
Strand 7
B
2 7anti-parallel
Strand 8
B
64 69anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 105first strand
Strand 2
A
93 96anti-parallel
Strand 3
A
169 176anti-parallel
Strand 4
A
155 164anti-parallel
Strand 5
A
146 152anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 105first strand
Strand 2
B
93 97anti-parallel
Strand 3
B
169 176anti-parallel
Strand 4
B
155 164anti-parallel
Strand 5
B
146 152anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 69first strand
Strand 2
C
2 7anti-parallel
Strand 3
C
38 43anti-parallel
Strand 4
C
28 34anti-parallel
Strand 5
D
28 34anti-parallel
Strand 6
D
38 43anti-parallel
Strand 7
D
2 6anti-parallel
Strand 8
D
66 69anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 105first strand
Strand 2
C
93 96anti-parallel
Strand 3
C
169 176anti-parallel
Strand 4
C
155 164anti-parallel
Strand 5
C
146 152anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 105first strand
Strand 2
D
93 96anti-parallel
Strand 3
D
169 176anti-parallel
Strand 4
D
155 164anti-parallel
Strand 5
D
146 152anti-parallel
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