Analysis of interatomic Contacts of Structural Units in PDB entry:
2JK4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2JK4 entry

There is 1 chain in PDB entry 2JK4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 288

There are 2 helices in PDB entry 2JK4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	10	16	Right-handed alpha
Helix 2	2	A	17	22	Right-handed alpha

There is 1 sheet ( A) in PDB entry 2JK4.

There are 20 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	36	first strand
Strand 2	A	43	51	anti-parallel
Strand 3	A	56	67	anti-parallel
Strand 4	A	72	78	anti-parallel
Strand 5	A	84	90	anti-parallel
Strand 6	A	98	106	anti-parallel
Strand 7	A	114	123	anti-parallel
Strand 8	A	126	135	anti-parallel
Strand 9	A	140	149	anti-parallel
Strand 10	A	152	161	anti-parallel
Strand 11	A	169	178	anti-parallel
Strand 12	A	181	188	anti-parallel
Strand 13	A	192	199	anti-parallel
Strand 14	A	205	215	anti-parallel
Strand 15	A	221	228	anti-parallel
Strand 16	A	234	241	anti-parallel
Strand 17	A	245	254	anti-parallel
Strand 18	A	258	266	anti-parallel
Strand 19	A	276	285	anti-parallel
Strand 20	A	29	36	parallel

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2JK4

Analysis of interatomic Contacts of Structural Units in PDB entry:
2JK4