Analysis of interatomic Contacts of Structural Units in PDB entry:
2JKT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JKT entry

There are 3 chains in PDB entry 2JKT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3SER 623
B
 LYS 12VAL 582
E
 LYS 12ILE 85
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are174 helices in PDB entry 2JKT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 19Right-handed alpha
Helix 2
2
A
27 41Right-handed alpha
Helix 3
3
A
51 67Right-handed alpha
Helix 4
4
A
75 83Right-handed alpha
Helix 5
5
A
87 101Right-handed alpha
Helix 6
6
A
105 122Right-handed alpha
Helix 7
7
A
124 139Right-handed alpha
Helix 8
8
A
140 148Right-handed alpha
Helix 9
9
A
149 157Right-handed alpha
Helix 10
10
A
161 179Right-handed alpha
Helix 11
11
A
187 194Right-handed alpha
Helix 12
12
A
195 198Right-handed 310
Helix 13
13
A
200 216Right-handed alpha
Helix 14
14
A
224 237Right-handed alpha
Helix 15
15
A
254 266Right-handed alpha
Helix 16
16
A
273 293Right-handed alpha
Helix 17
17
A
299 321Right-handed alpha
Helix 18
18
A
323 340Right-handed alpha
Helix 19
19
A
343 357Right-handed alpha
Helix 20
20
A
364 368Right-handed 310
Helix 21
21
A
369 380Right-handed alpha
Helix 22
22
A
382 395Right-handed alpha
Helix 23
23
A
401 415Right-handed alpha
Helix 24
24
A
417 436Right-handed alpha
Helix 25
25
A
438 450Right-handed alpha
Helix 26
26
A
453 457Right-handed 310
Helix 27
27
A
458 472Right-handed alpha
Helix 28
28
A
475 487Right-handed alpha
Helix 29
29
A
493 507Right-handed alpha
Helix 30
30
A
514 517Right-handed 310
Helix 31
31
A
518 531Right-handed alpha
Helix 32
32
A
534 552Right-handed alpha
Helix 33
33
A
555 561Right-handed alpha
Helix 34
34
A
565 570Right-handed alpha
Helix 35
35
A
573 589Right-handed alpha
Helix 36
36
A
591 599Right-handed alpha
Helix 37
37
B
14 24Right-handed alpha
Helix 38
38
B
26 40Right-handed alpha
Helix 39
39
B
50 56Right-handed alpha
Helix 40
40
B
62 75Right-handed alpha
Helix 41
41
B
84 86Right-handed 310
Helix 42
42
B
87 95Right-handed alpha
Helix 43
43
B
99 111Right-handed alpha
Helix 44
44
B
115 120Right-handed 310
Helix 45
45
B
122 130Right-handed alpha
Helix 46
46
B
134 150Right-handed alpha
Helix 47
47
B
152 159Right-handed alpha
Helix 48
48
B
160 169Right-handed alpha
Helix 49
49
B
173 191Right-handed alpha
Helix 50
50
B
202 211Right-handed alpha
Helix 51
51
B
218 227Right-handed alpha
Helix 52
52
B
233 245Right-handed alpha
Helix 53
53
B
246 248Right-handed 310
Helix 54
54
B
252 267Right-handed alpha
Helix 55
55
B
273 290Right-handed alpha
Helix 56
56
B
295 313Right-handed alpha
Helix 57
57
B
314 318Right-handed 310
Helix 58
58
B
318 325Right-handed 310
Helix 59
59
B
331 346Right-handed alpha
Helix 60
60
B
350 364Right-handed alpha
Helix 61
61
B
366 384Right-handed alpha
Helix 62
62
B
387 400Right-handed alpha
Helix 63
63
B
403 419Right-handed alpha
Helix 64
64
B
425 433Right-handed alpha
Helix 65
65
B
441 454Right-handed alpha
Helix 66
66
B
455 460Right-handed 310
Helix 67
67
B
461 471Right-handed alpha
Helix 68
68
B
477 495Right-handed alpha
Helix 69
69
B
499 512Right-handed alpha
Helix 70
70
B
516 533Right-handed alpha
Helix 71
71
B
533 542Right-handed alpha
Helix 72
72
B
556 565Right-handed alpha
Helix 73
73
B
570 573Right-handed 310
Helix 74
74
B
577 581Right-handed 310
Helix 75
75
E
14 24Right-handed alpha
Helix 76
76
E
26 40Right-handed alpha
Helix 77
77
E
50 56Right-handed alpha
Helix 78
78
E
62 75Right-handed alpha
Helix 79
79
E
84 86Right-handed 310
Helix 80
80
E
87 95Right-handed alpha
Helix 81
81
E
99 111Right-handed alpha
Helix 82
82
E
115 120Right-handed 310
Helix 83
83
E
122 130Right-handed alpha
Helix 84
84
E
134 150Right-handed alpha
Helix 85
85
E
152 159Right-handed alpha
Helix 86
86
E
160 169Right-handed alpha
Helix 87
87
E
173 191Right-handed alpha
Helix 88
88
E
202 211Right-handed alpha
Helix 89
89
E
218 227Right-handed alpha
Helix 90
90
E
233 245Right-handed alpha
Helix 91
91
E
246 248Right-handed 310
Helix 92
92
E
252 267Right-handed alpha
Helix 93
93
E
273 290Right-handed alpha
Helix 94
94
E
295 313Right-handed alpha
Helix 95
95
E
314 318Right-handed 310
Helix 96
96
E
318 325Right-handed 310
Helix 97
97
E
331 346Right-handed alpha
Helix 98
98
E
350 364Right-handed alpha
Helix 99
99
E
366 384Right-handed alpha
Helix 100
100
E
387 400Right-handed alpha
Helix 101
101
E
403 419Right-handed alpha
Helix 102
102
E
425 433Right-handed alpha
Helix 103
103
E
441 454Right-handed alpha
Helix 104
104
E
455 460Right-handed 310
Helix 105
105
E
461 471Right-handed alpha
Helix 106
106
E
477 495Right-handed alpha
Helix 107
107
E
499 512Right-handed alpha
Helix 108
108
E
516 533Right-handed alpha
Helix 109
109
E
533 542Right-handed alpha
Helix 110
110
E
556 565Right-handed alpha
Helix 111
111
E
570 573Right-handed 310
Helix 112
112
E
577 581Right-handed 310
Helix 113
113
I
24 40Right-handed alpha
Helix 114
114
I
76 95Right-handed alpha
Helix 115
115
I
101 106Right-handed alpha
Helix 116
116
I
106 117Right-handed alpha
Helix 117
117
I
127 136Right-handed alpha
Helix 118
118
L
10 21Right-handed alpha
Helix 119
119
L
27 41Right-handed alpha
Helix 120
120
L
51 67Right-handed alpha
Helix 121
121
L
75 83Right-handed alpha
Helix 122
122
L
87 101Right-handed alpha
Helix 123
123
L
105 122Right-handed alpha
Helix 124
124
L
124 139Right-handed alpha
Helix 125
125
L
140 148Right-handed alpha
Helix 126
126
L
149 157Right-handed alpha
Helix 127
127
L
161 179Right-handed alpha
Helix 128
128
L
187 194Right-handed alpha
Helix 129
129
L
195 198Right-handed 310
Helix 130
130
L
200 215Right-handed alpha
Helix 131
131
L
224 239Right-handed alpha
Helix 132
132
L
254 266Right-handed alpha
Helix 133
133
L
273 293Right-handed alpha
Helix 134
134
L
299 321Right-handed alpha
Helix 135
135
L
323 340Right-handed alpha
Helix 136
136
L
343 357Right-handed alpha
Helix 137
137
L
364 368Right-handed 310
Helix 138
138
L
369 380Right-handed alpha
Helix 139
139
L
382 395Right-handed alpha
Helix 140
140
L
401 415Right-handed alpha
Helix 141
141
L
417 436Right-handed alpha
Helix 142
142
L
438 450Right-handed alpha
Helix 143
143
L
453 457Right-handed 310
Helix 144
144
L
458 472Right-handed alpha
Helix 145
145
L
475 487Right-handed alpha
Helix 146
146
L
493 507Right-handed alpha
Helix 147
147
L
514 517Right-handed 310
Helix 148
148
L
518 531Right-handed alpha
Helix 149
149
L
534 552Right-handed alpha
Helix 150
150
L
555 561Right-handed alpha
Helix 151
151
L
565 570Right-handed alpha
Helix 152
152
L
573 589Right-handed alpha
Helix 153
153
L
591 599Right-handed alpha
Helix 154
154
M
26 34Right-handed alpha
Helix 155
155
M
74 94Right-handed alpha
Helix 156
156
M
97 103Right-handed alpha
Helix 157
157
M
104 113Right-handed alpha
Helix 158
158
M
128 132Right-handed 310
Helix 159
159
M
254 257Right-handed 310
Helix 160
160
M
346 348Right-handed 310
Helix 161
161
M
414 416Right-handed 310
Helix 162
162
S
24 40Right-handed alpha
Helix 163
163
S
76 95Right-handed alpha
Helix 164
164
S
101 106Right-handed alpha
Helix 165
165
S
106 117Right-handed alpha
Helix 166
166
S
127 136Right-handed alpha
Helix 167
167
U
26 34Right-handed alpha
Helix 168
168
U
74 94Right-handed alpha
Helix 169
169
U
97 103Right-handed alpha
Helix 170
170
U
104 113Right-handed alpha
Helix 171
171
U
128 132Right-handed 310
Helix 172
172
U
254 257Right-handed 310
Helix 173
173
U
346 348Right-handed 310
Helix 174
174
U
414 416Right-handed 310
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There are 18 sheets in PDB entry 2JKT. Click on sheet of interest to get list of strands forming it: AA, AB, IA, IB, LA, LB, MA, MB, MC, MD, ME, SA, SB, UA, UB, UC, UD, UE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
252 253anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 614first strand
Strand 2
M
330 335anti-parallel
Strand 3
M
363 372anti-parallel
Strand 4
M
302 309anti-parallel
Strand 5
M
287 292anti-parallel
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There are 5 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
14 19first strand
Strand 2
I
2 9anti-parallel
Strand 3
I
65 71anti-parallel
Strand 4
I
55 62anti-parallel
Strand 5
I
49 52anti-parallel
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There are 2 strands in IB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
118 119first strand
Strand 2
I
122 123anti-parallel
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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
248 249first strand
Strand 2
L
252 253anti-parallel
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There are 5 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
611 614first strand
Strand 2
U
330 335anti-parallel
Strand 3
U
363 372anti-parallel
Strand 4
U
302 309anti-parallel
Strand 5
U
287 292anti-parallel
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There are 5 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
14 19first strand
Strand 2
M
4 8anti-parallel
Strand 3
M
64 69anti-parallel
Strand 4
M
54 59anti-parallel
Strand 5
M
47 49anti-parallel
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There are 2 strands in MB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
116 117first strand
Strand 2
M
120 121anti-parallel
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There are 4 strands in MC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
245 248first strand
Strand 2
M
270 279anti-parallel
Strand 3
M
191 197anti-parallel
Strand 4
M
171 185anti-parallel
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There are 4 strands in MD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
245 248first strand
Strand 2
M
270 279anti-parallel
Strand 3
M
200 205anti-parallel
Strand 4
M
171 185anti-parallel
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There are 4 strands in ME sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
252 253first strand
Strand 2
M
263 265anti-parallel
Strand 3
M
211 216anti-parallel
Strand 4
M
401 407anti-parallel
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There are 5 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
14 19first strand
Strand 2
S
2 9anti-parallel
Strand 3
S
65 71anti-parallel
Strand 4
S
55 62anti-parallel
Strand 5
S
49 52anti-parallel
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There are 2 strands in SB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
118 119first strand
Strand 2
S
122 123anti-parallel
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There are 5 strands in UA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
14 19first strand
Strand 2
U
4 8anti-parallel
Strand 3
U
64 69anti-parallel
Strand 4
U
54 59anti-parallel
Strand 5
U
47 49anti-parallel
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There are 2 strands in UB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
116 117first strand
Strand 2
U
120 121anti-parallel
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There are 4 strands in UC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
245 248first strand
Strand 2
U
270 279anti-parallel
Strand 3
U
191 197anti-parallel
Strand 4
U
171 185anti-parallel
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There are 4 strands in UD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
245 248first strand
Strand 2
U
270 279anti-parallel
Strand 3
U
200 205anti-parallel
Strand 4
U
171 185anti-parallel
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There are 4 strands in UE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
252 253first strand
Strand 2
U
263 265anti-parallel
Strand 3
U
211 216anti-parallel
Strand 4
U
401 407anti-parallel
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