Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2JQB entry
There are 3 chains in PDB entry 2JQB
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
ASP 1 | LYS 9 |
A
|
ASN 11 | SER 12 |
A
|
TRP 14 | THR 15 |
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There is 1
helix in PDB entry 2JQB. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 11 |
15 | Right-handed 310 |
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There are no sheets in PDB entry
2JQB
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il