Analysis of interatomic Contacts of Structural Units in PDB entry:
2JU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JU0 entry

There are 2 chains in PDB entry 2JU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3PRO 177
B
 ALA 121PHE 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2JU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 17Right-handed alpha
Helix 2
2
A
23 38Right-handed alpha
Helix 3
3
A
45 56Right-handed alpha
Helix 4
4
A
61 73Right-handed alpha
Helix 5
5
A
81 92Right-handed alpha
Helix 6
6
A
98 108Right-handed alpha
Helix 7
7
A
118 130Right-handed alpha
Helix 8
8
A
133 138Right-handed alpha
Helix 9
9
A
144 157Right-handed alpha
Helix 10
10
A
166 175Right-handed alpha
Helix 11
11
B
125 136Right-handed alpha
Helix 12
12
B
155 169Right-handed alpha
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There are 2 sheets in PDB entry 2JU0. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
79 80anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
163 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il