Analysis of interatomic Contacts of Structural Units in PDB entry:
2JW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JW8 entry

There are 2 chains in PDB entry 2JW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 248PRO 365
B
 THR 248PRO 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2JW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
251 256Right-handed 310
Helix 2
2
A
270 275Right-handed alpha
Helix 3
3
A
291 296Right-handed alpha
Helix 4
4
A
297 299Right-handed 310
Helix 5
5
A
301 307Right-handed alpha
Helix 6
6
A
311 316Right-handed alpha
Helix 7
7
A
346 359Right-handed alpha
Helix 8
8
A
359 364Right-handed alpha
Helix 9
9
B
252 256Right-handed 310
Helix 10
10
B
270 275Right-handed alpha
Helix 11
11
B
281 285Right-handed 310
Helix 12
12
B
291 296Right-handed alpha
Helix 13
13
B
297 299Right-handed 310
Helix 14
14
B
302 307Right-handed alpha
Helix 15
15
B
311 316Right-handed alpha
Helix 16
16
B
346 361Right-handed alpha
Helix 17
17
B
362 364Right-handed 310
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There is 1 sheet ( A) in PDB entry 2JW8.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 326first strand
Strand 2
A
329 339anti-parallel
Strand 3
B
329 338anti-parallel
Strand 4
B
322 326anti-parallel
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