Analysis of interatomic Contacts of Structural Units in PDB entry:
2K6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2K6H entry

There is 1 chain in PDB entry 2K6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2K6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 36Right-handed alpha
Helix 2
2
A
99 103Right-handed 310
Helix 3
3
A
114 119Right-handed alpha
Helix 4
4
A
130 143Right-handed alpha
Helix 5
5
A
150 165Right-handed alpha
Helix 6
6
A
165 171Right-handed alpha
Helix 7
7
A
171 183Right-handed alpha
Helix 8
8
A
191 200Right-handed alpha
Helix 9
9
A
200 214Right-handed alpha
Helix 10
10
A
219 224Right-handed alpha
Helix 11
11
A
229 237Right-handed alpha
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There are 3 sheets in PDB entry 2K6H. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
58 63parallel
Strand 3
A
68 73anti-parallel
Strand 4
A
80 85anti-parallel
Strand 5
A
89 92anti-parallel
Strand 6
A
107 108parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
42 46anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
188 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il