Analysis of interatomic Contacts of Structural Units in PDB entry:
2KBF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2KBF entry

There is 1 chain in PDB entry 2KBF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 296ASP 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2KBF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
313 326Right-handed alpha
Helix 2
2
A
339 353Right-handed alpha
Helix 3
3
A
365 378Right-handed alpha
Helix 4
4
A
391 395Right-handed 310
Helix 5
5
A
416 426Right-handed alpha
Helix 6
6
A
442 457Right-handed alpha
Helix 7
7
A
469 479Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2KBF.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
383 386parallel
Strand 3
A
333 336parallel
Strand 4
A
402 404parallel
Strand 5
A
436 439parallel
Strand 6
A
307 309parallel
Strand 7
A
462 464parallel
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