Analysis of interatomic Contacts of Structural Units in PDB entry:
2KC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2KC0 entry

There is 1 chain in PDB entry 2KC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14GLN 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2KC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 22Right-handed alpha
Helix 2
2
A
186 190Right-handed 310
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There are 3 sheets in PDB entry 2KC0. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
62 64anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 58first strand
Strand 2
A
45 50anti-parallel
Strand 3
A
72 84anti-parallel
Strand 4
A
87 100anti-parallel
Strand 5
A
105 115anti-parallel
Strand 6
A
123 135anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 158first strand
Strand 2
A
165 170anti-parallel
Strand 3
A
176 182anti-parallel
Strand 4
A
191 197anti-parallel
Strand 5
A
207 212anti-parallel
Strand 6
A
219 227anti-parallel
Strand 7
A
233 242anti-parallel
Strand 8
A
245 254anti-parallel
Strand 9
A
150 158anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il