Analysis of interatomic Contacts of Structural Units in PDB entry:
2KJE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2KJE entry

There are 2 chains in PDB entry 2KJE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 1764GLN 1855
B
SER 50GLU 91
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2KJE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1765 1786Right-handed alpha
Helix 2
2
A
1793 1807Right-handed alpha
Helix 3
3
A
1817 1834Right-handed alpha
Helix 4
4
A
1841 1855Right-handed alpha
Helix 5
5
B
58 64Right-handed alpha
Helix 6
6
B
71 75Right-handed 310
Helix 7
7
B
79 83Right-handed 310
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There are no sheets in PDB entry 2KJE

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il