Analysis of interatomic Contacts of Structural Units in PDB entry:
2KLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2KLT entry

There is 1 chain in PDB entry 2KLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 501ASP 656
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2KLT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
515 518Right-handed 310
Helix 2
2
A
624 630Right-handed alpha
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There are 3 sheets in PDB entry 2KLT. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
569 574first strand
Strand 2
A
520 527anti-parallel
Strand 3
A
504 507anti-parallel
Strand 4
A
634 635parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
511 513first strand
Strand 2
A
640 644parallel
Strand 3
A
586 591anti-parallel
Strand 4
A
532 542anti-parallel
Strand 5
A
557 564anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
511 513first strand
Strand 2
A
640 644parallel
Strand 3
A
586 591anti-parallel
Strand 4
A
532 542anti-parallel
Strand 5
A
595 597anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il