Analysis of interatomic Contacts of Structural Units in PDB entry:
2KMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2KMV entry

There is 1 chain in PDB entry 2KMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1047THR 1231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2KMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1069 1080Right-handed alpha
Helix 2
2
A
1081 1083Right-handed 310
Helix 3
3
A
1086 1101Right-handed alpha
Helix 4
4
A
1126 1130Right-handed 310
Helix 5
5
A
1171 1175Right-handed 310
Helix 6
6
A
1184 1192Right-handed alpha
Helix 7
7
A
1196 1209Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2KMV.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1055 1061first strand
Strand 2
A
1221 1229anti-parallel
Strand 3
A
1212 1218anti-parallel
Strand 4
A
1178 1183anti-parallel
Strand 5
A
1118 1123anti-parallel
Strand 6
A
1112 1114anti-parallel
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