Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2KTO entry
There are 7 chains in PDB entry 2KTO
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
PRO 3 | ALA 4 |
A
|
TRP 9 | ILE 12 |
A
|
ALA 14 | VAL 16 |
A
|
VAL 18 | VAL 18 |
A
|
ALA 20 | PRO 24 |
A
|
LYS 27 | CYS 28 |
A
|
SER 30 | CYS 32 |
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There is 1
helix in PDB entry 2KTO. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 18 |
23 | Right-handed alpha |
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There are no sheets in PDB entry
2KTO
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il