Analysis of interatomic Contacts of Structural Units in PDB entry:
2L8B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2L8B entry

There is 1 chain in PDB entry 2L8B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 381THR 569
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2L8B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
389 404Right-handed alpha
Helix 2
2
A
408 412Right-handed 310
Helix 3
3
A
416 430Right-handed alpha
Helix 4
4
A
442 459Right-handed alpha
Helix 5
5
A
470 477Right-handed alpha
Helix 6
6
A
512 528Right-handed alpha
Helix 7
7
A
543 553Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2L8B.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 434first strand
Strand 2
A
532 536parallel
Strand 3
A
504 509parallel
Strand 4
A
463 466parallel
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