Analysis of interatomic Contacts of Structural Units in PDB entry:
2LAV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2LAV entry

There is 1 chain in PDB entry 2LAV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2LAV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
78 91Right-handed alpha
Helix 2
2
A
92 104Right-handed alpha
Helix 3
3
A
137 145Right-handed alpha
Helix 4
4
A
150 170Right-handed alpha
Helix 5
5
A
179 181Right-handed 310
Helix 6
6
A
205 209Right-handed 310
Helix 7
7
A
229 235Right-handed alpha
Helix 8
8
A
240 257Right-handed alpha
Helix 9
9
A
259 263Right-handed 310
Helix 10
10
A
267 281Right-handed alpha
Helix 11
11
A
281 290Right-handed alpha
Helix 12
12
A
296 308Right-handed alpha
Helix 13
13
A
316 331Right-handed alpha
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There are 2 sheets in PDB entry 2LAV. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
51 56anti-parallel
Strand 4
A
68 74anti-parallel
Strand 5
A
124 132anti-parallel
Strand 6
A
113 121anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
193 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il