Analysis of interatomic Contacts of Structural Units in PDB entry:
2LBU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2LBU entry

There are 5 chains in PDB entry 2LBU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 225HIS 295
B
 ARG 225HIS 295
C
 ARG 225HIS 295
D
 ARG 225HIS 295
E
 ARG 225HIS 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2LBU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
247 250Right-handed 310
Helix 2
2
B
248 250Right-handed 310
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There are 3 sheets in PDB entry 2LBU. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 234first strand
Strand 2
A
262 270parallel
Strand 3
B
226 234parallel
Strand 4
B
262 270parallel
Strand 5
C
226 234parallel
Strand 6
C
262 270parallel
Strand 7
D
227 234parallel
Strand 8
D
262 270parallel
Strand 9
E
226 234parallel
Strand 10
E
262 270parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
274 277parallel
Strand 3
B
238 241parallel
Strand 4
B
274 277parallel
Strand 5
C
238 241parallel
Strand 6
C
274 277parallel
Strand 7
D
238 241parallel
Strand 8
D
274 277parallel
Strand 9
E
238 241parallel
Strand 10
E
274 277parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
280 282parallel
Strand 3
B
244 246parallel
Strand 4
B
280 281parallel
Strand 5
C
244 245parallel
Strand 6
C
280 282parallel
Strand 7
D
244 246parallel
Strand 8
D
280 281parallel
Strand 9
E
244 245parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il