Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2LNL entry
There is 1 chain in PDB entry 2LNL
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
PRO 29 | GLY 324 |
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There are 13
helices in PDB entry 2LNL. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 37 |
67 | Right-handed alpha |
Helix 2 |
2 | A
| 74 |
101 | Right-handed alpha |
Helix 3 |
3 | A
| 107 |
139 | Right-handed alpha |
Helix 4 |
4 | A
| 148 |
174 | Right-handed alpha |
Helix 5 |
5 | A
| 200 |
205 | Right-handed alpha |
Helix 6 |
6 | A
| 207 |
226 | Right-handed alpha |
Helix 7 |
7 | A
| 234 |
239 | Right-handed alpha |
Helix 8 |
8 | A
| 239 |
268 | Right-handed alpha |
Helix 9 |
9 | A
| 275 |
283 | Right-handed alpha |
Helix 10 |
10 | A
| 284 |
294 | Right-handed alpha |
Helix 11 |
11 | A
| 295 |
298 | Right-handed 310 |
Helix 12 |
12 | A
| 299 |
309 | Right-handed alpha |
Helix 13 |
13 | A
| 310 |
323 | Right-handed alpha |
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There are no sheets in PDB entry
2LNL
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il