Analysis of interatomic Contacts of Structural Units in PDB entry:
2LQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2LQI entry

There are 2 chains in PDB entry 2LQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LEU 87
B
 GLY 101ALA 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2LQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 10Right-handed 310
Helix 2
2
A
11 27Right-handed alpha
Helix 3
3
A
31 36Right-handed 310
Helix 4
4
A
37 58Right-handed alpha
Helix 5
5
A
60 85Right-handed alpha
Helix 6
6
B
108 119Right-handed alpha
Helix 7
7
B
120 122Right-handed 310
Helix 8
8
B
137 140Right-handed 310
Helix 9
9
B
141 150Right-handed alpha
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There are no sheets in PDB entry 2LQI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il