Analysis of interatomic Contacts of Structural Units in PDB entry:
2M5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2M5B entry

There are 4 chains in PDB entry 2M5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 18GLY 186
B
 GLU 80ALA 91
B
 VAL 93ASP 95
B
 ASP 98ILE 101
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 2M5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 50Right-handed alpha
Helix 2
2
A
69 82Right-handed alpha
Helix 3
3
A
82 98Right-handed alpha
Helix 4
4
A
106 119Right-handed alpha
Helix 5
5
A
120 122Right-handed 310
Helix 6
6
A
124 146Right-handed alpha
Helix 7
7
A
150 163Right-handed alpha
Helix 8
8
A
166 174Right-handed alpha
Helix 9
9
A
176 183Right-handed 310
Helix 10
10
B
81 89Right-handed alpha
Helix 11
11
B
94 100Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2M5B
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il