Analysis of interatomic Contacts of Structural Units in PDB entry:
2M6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2M6L entry

There is 1 chain in PDB entry 2M6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24PHE 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2M6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 60Right-handed alpha
Helix 2
2
A
86 93Right-handed alpha
Helix 3
3
A
104 110Right-handed alpha
Helix 4
4
A
126 137Right-handed alpha
Helix 5
5
A
148 161Right-handed alpha
Helix 6
6
A
162 184Right-handed alpha
Helix 7
7
A
210 218Right-handed alpha
Helix 8
8
A
247 252Right-handed alpha
Helix 9
9
A
265 274Right-handed alpha
Helix 10
10
A
275 280Right-handed alpha
Helix 11
11
A
281 287Right-handed alpha
Helix 12
12
A
294 298Right-handed 310
Helix 13
13
A
303 311Right-handed alpha
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There are 4 sheets in PDB entry 2M6L. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
36 39anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
115 118parallel
Strand 3
A
139 141parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
190 197parallel
Strand 3
A
202 205anti-parallel
Strand 4
A
243 244anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
190 197parallel
Strand 3
A
259 260parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il