Analysis of interatomic Contacts of Structural Units in PDB entry:
2M9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2M9V entry

There is 1 chain in PDB entry 2M9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12LEU 181
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2M9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
21 29Right-handed alpha
Helix 3
3
A
46 52Right-handed alpha
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
56 61Right-handed alpha
Helix 6
6
A
62 64Right-handed 310
Helix 7
7
A
96 108Right-handed alpha
Helix 8
8
A
132 138Right-handed alpha
Helix 9
9
A
142 146Right-handed 310
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There is 1 sheet ( A) in PDB entry 2M9V.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 131first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
90 95parallel
Strand 4
A
79 85anti-parallel
Strand 5
A
66 76anti-parallel
Strand 6
A
119 123anti-parallel
Strand 7
A
159 163anti-parallel
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