Analysis of interatomic Contacts of Structural Units in PDB entry:
2MMC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2MMC entry

There is 1 chain in PDB entry 2MMC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2MMC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 28Right-handed alpha
Helix 2
2
A
30 36Right-handed alpha
Helix 3
3
A
68 72Right-handed 310
Helix 4
4
A
76 81Right-handed alpha
Helix 5
5
A
94 100Right-handed alpha
Helix 6
6
A
100 112Right-handed alpha
Helix 7
7
A
132 136Right-handed 310
Helix 8
8
A
137 143Right-handed alpha
Helix 9
9
A
157 170Right-handed alpha
Helix 10
10
A
190 206Right-handed alpha
Helix 11
11
A
210 216Right-handed alpha
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There are 2 sheets in PDB entry 2MMC. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
45 54anti-parallel
Strand 3
A
57 66anti-parallel
Strand 4
A
9 17parallel
Strand 5
A
85 91parallel
Strand 6
A
117 122parallel
Strand 7
A
145 148parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
45 54anti-parallel
Strand 3
A
176 178anti-parallel
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