Analysis of interatomic Contacts of Structural Units in PDB entry:
2MP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2MP0 entry

There are 2 chains in PDB entry 2MP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 249
B
 THR 319LYS 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2MP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 65Right-handed alpha
Helix 2
2
A
66 81Right-handed alpha
Helix 3
3
A
82 97Right-handed alpha
Helix 4
4
A
99 117Right-handed alpha
Helix 5
5
A
120 143Right-handed alpha
Helix 6
6
A
164 170Right-handed alpha
Helix 7
7
A
189 198Right-handed alpha
Helix 8
8
A
232 249Right-handed alpha
Helix 9
9
B
332 336Right-handed 310
Helix 10
10
B
338 343Right-handed alpha
Helix 11
11
B
394 399Right-handed 310
Helix 12
12
B
423 431Right-handed alpha
Helix 13
13
B
442 446Right-handed 310
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There are 4 sheets in PDB entry 2MP0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
176 181parallel
Strand 3
A
156 160parallel
Strand 4
A
12 18parallel
Strand 5
A
216 220anti-parallel
Strand 6
A
227 229anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
320 323first strand
Strand 2
B
462 467anti-parallel
Strand 3
B
448 451anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 413first strand
Strand 2
B
365 370anti-parallel
Strand 3
B
376 381anti-parallel
Strand 4
B
386 390anti-parallel
Strand 5
B
436 440anti-parallel
Strand 6
B
348 354anti-parallel
Strand 7
B
328 331anti-parallel
Strand 8
B
455 456anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 360first strand
Strand 2
B
418 422anti-parallel
Strand 3
B
403 405anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il