Analysis of interatomic Contacts of Structural Units in PDB entry:
2MRI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2MRI entry

There is 1 chain in PDB entry 2MRI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 181ARG 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2MRI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
184 199Right-handed alpha
Helix 2
2
A
206 223Right-handed alpha
Helix 3
3
A
230 236Right-handed alpha
Helix 4
4
A
239 244Right-handed alpha
Helix 5
5
A
248 261Right-handed alpha
Helix 6
6
A
262 277Right-handed alpha
Helix 7
7
A
277 283Right-handed alpha
Helix 8
8
A
283 303Right-handed alpha
Helix 9
9
A
310 316Right-handed alpha
Helix 10
10
A
320 334Right-handed alpha
Helix 11
11
A
343 345Right-handed 310
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There is 1 sheet ( A) in PDB entry 2MRI.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
A
347 353anti-parallel
Strand 3
A
337 342anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il