Analysis of interatomic Contacts of Structural Units in PDB entry:
2MYI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2MYI entry

There is 1 chain in PDB entry 2MYI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2MYI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 17Right-handed alpha
Helix 2
2
A
18 26Right-handed alpha
Helix 3
3
A
45 49Right-handed 310
Helix 4
4
A
87 92Right-handed alpha
Helix 5
5
A
115 139Right-handed alpha
Helix 6
6
A
157 161Right-handed 310
Helix 7
7
A
171 183Right-handed alpha
Helix 8
8
A
208 213Right-handed alpha
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There are 2 sheets in PDB entry 2MYI. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
68 72anti-parallel
Strand 3
A
30 33anti-parallel
Strand 4
A
2 6parallel
Strand 5
A
249 252anti-parallel
Strand 6
A
234 236anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
95 98anti-parallel
Strand 3
A
103 108anti-parallel
Strand 4
A
143 148parallel
Strand 5
A
221 224anti-parallel
Strand 6
A
188 189anti-parallel
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