Analysis of interatomic Contacts of Structural Units in PDB entry:
2MZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2MZW entry

There are 2 chains in PDB entry 2MZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 401GLY 692
B
 MET 1ASP 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2MZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
416 434Right-handed alpha
Helix 2
2
A
454 469Right-handed alpha
Helix 3
3
A
534 536Right-handed 310
Helix 4
4
A
537 550Right-handed alpha
Helix 5
5
A
577 597Right-handed alpha
Helix 6
6
A
615 625Right-handed alpha
Helix 7
7
A
653 662Right-handed alpha
Helix 8
8
A
679 690Right-handed alpha
Helix 9
9
B
6 22Right-handed alpha
Helix 10
10
B
22 27Right-handed alpha
Helix 11
11
B
30 48Right-handed alpha
Helix 12
12
B
52 63Right-handed alpha
Helix 13
13
B
68 80Right-handed alpha
Helix 14
14
B
81 83Right-handed 310
Helix 15
15
B
90 98Right-handed alpha
Helix 16
16
B
112 116Right-handed 310
Helix 17
17
B
191 197Right-handed alpha
Helix 18
18
B
201 213Right-handed alpha
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There are 6 sheets in PDB entry 2MZW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 440first strand
Strand 2
A
449 453anti-parallel
Strand 3
A
407 414anti-parallel
Strand 4
A
473 475anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 498first strand
Strand 2
A
505 514anti-parallel
Strand 3
A
563 570anti-parallel
Strand 4
A
523 526parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 630first strand
Strand 2
A
639 646anti-parallel
Strand 3
A
634 636anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 630first strand
Strand 2
A
639 646anti-parallel
Strand 3
A
604 612anti-parallel
Strand 4
A
670 674anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 124first strand
Strand 2
B
129 135anti-parallel
Strand 3
B
141 147anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 156first strand
Strand 2
B
163 172anti-parallel
Strand 3
B
183 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il