Analysis of interatomic Contacts of Structural Units in PDB entry:
2N8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2N8L entry

There are 2 chains in PDB entry 2N8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ALA 191
B
 G 1 C 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2N8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 39Right-handed alpha
Helix 2
2
A
40 42Right-handed 310
Helix 3
3
A
43 53Right-handed alpha
Helix 4
4
A
76 95Right-handed alpha
Helix 5
5
A
113 120Right-handed alpha
Helix 6
6
A
125 135Right-handed alpha
Helix 7
7
A
146 149Right-handed 310
Helix 8
8
A
159 179Right-handed alpha
Helix 9
9
A
180 182Right-handed 310
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There is 1 sheet ( A) in PDB entry 2N8L.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
68 75anti-parallel
Strand 3
A
23 30anti-parallel
Strand 4
A
107 112anti-parallel
Strand 5
A
151 157anti-parallel
Strand 6
A
137 139anti-parallel
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