Analysis of interatomic Contacts of Structural Units in PDB entry:
2NM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NM0 entry

There are 2 chains in PDB entry 2NM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 233
B
 MET 1GLY 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2NM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
51 66Right-handed alpha
Helix 3
3
A
92 118Right-handed alpha
Helix 4
4
A
133 159Right-handed alpha
Helix 5
5
A
185 191Right-handed alpha
Helix 6
6
A
200 213Right-handed alpha
Helix 7
7
A
214 217Right-handed 310
Helix 8
8
B
12 25Right-handed alpha
Helix 9
9
B
51 67Right-handed alpha
Helix 10
10
B
88 118Right-handed alpha
Helix 11
11
B
133 159Right-handed alpha
Helix 12
12
B
185 190Right-handed alpha
Helix 13
13
B
191 193Right-handed 310
Helix 14
14
B
200 212Right-handed alpha
Helix 15
15
B
213 217Right-handed 310
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There are 2 sheets in PDB entry 2NM0. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
28 33parallel
Strand 3
A
4 8parallel
Strand 4
A
71 75parallel
Strand 5
A
120 125parallel
Strand 6
A
163 170parallel
Strand 7
A
223 226parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
28 33parallel
Strand 3
B
4 8parallel
Strand 4
B
71 75parallel
Strand 5
B
120 125parallel
Strand 6
B
163 170parallel
Strand 7
B
223 226parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il