Analysis of interatomic Contacts of Structural Units in PDB entry:
2NMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NMR entry

There is 1 chain in PDB entry 2NMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2PRO 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2NMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 25Right-handed alpha
Helix 2
2
A
26 36Right-handed alpha
Helix 3
3
A
37 39Right-handed 310
Helix 4
4
A
40 62Right-handed alpha
Helix 5
5
A
62 69Right-handed alpha
Helix 6
6
A
80 84Right-handed 310
Helix 7
7
A
97 120Right-handed alpha
Helix 8
8
A
124 139Right-handed alpha
Helix 9
9
A
139 149Right-handed alpha
Helix 10
10
A
151 156Right-handed alpha
Helix 11
11
A
167 181Right-handed alpha
Helix 12
12
A
197 218Right-handed alpha
Helix 13
13
A
219 221Right-handed 310
Helix 14
14
A
224 254Right-handed alpha
Helix 15
15
A
257 273Right-handed alpha
Helix 16
16
A
280 301Right-handed alpha
Helix 17
17
A
317 333Right-handed alpha
Helix 18
18
A
334 338Right-handed 310
Helix 19
19
A
347 381Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2NMR.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
95 96anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il