Analysis of interatomic Contacts of Structural Units in PDB entry:
2NOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NOG entry

There are 2 chains in PDB entry 2NOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 739GLN 896
B
 GLU 739ILE 895
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2NOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
755 759Right-handed 310
Helix 2
2
A
761 780Right-handed alpha
Helix 3
3
A
791 806Right-handed alpha
Helix 4
4
A
811 822Right-handed alpha
Helix 5
5
A
830 845Right-handed alpha
Helix 6
6
A
848 856Right-handed alpha
Helix 7
7
A
860 875Right-handed alpha
Helix 8
8
A
876 878Right-handed 310
Helix 9
9
A
880 896Right-handed alpha
Helix 10
10
B
755 759Right-handed 310
Helix 11
11
B
761 779Right-handed alpha
Helix 12
12
B
791 806Right-handed alpha
Helix 13
13
B
811 822Right-handed alpha
Helix 14
14
B
830 845Right-handed alpha
Helix 15
15
B
848 856Right-handed alpha
Helix 16
16
B
860 875Right-handed alpha
Helix 17
17
B
876 878Right-handed 310
Helix 18
18
B
880 895Right-handed alpha
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There are no sheets in PDB entry 2NOG
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il