Analysis of interatomic Contacts of Structural Units in PDB entry:
2NRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NRV entry

There are 2 chains in PDB entry 2NRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 340LEU 557
B
 ARG 340LEU 554
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 2NRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
343 354Right-handed alpha
Helix 2
2
A
390 393Right-handed 310
Helix 3
3
A
404 418Right-handed alpha
Helix 4
4
A
431 445Right-handed alpha
Helix 5
5
A
474 493Right-handed alpha
Helix 6
6
A
495 509Right-handed alpha
Helix 7
7
A
515 527Right-handed alpha
Helix 8
8
A
528 534Right-handed alpha
Helix 9
9
A
536 545Right-handed alpha
Helix 10
10
A
546 557Right-handed alpha
Helix 11
11
B
343 355Right-handed alpha
Helix 12
12
B
390 393Right-handed 310
Helix 13
13
B
404 418Right-handed alpha
Helix 14
14
B
431 445Right-handed alpha
Helix 15
15
B
474 493Right-handed alpha
Helix 16
16
B
495 509Right-handed alpha
Helix 17
17
B
515 527Right-handed alpha
Helix 18
18
B
528 533Right-handed alpha
Helix 19
19
B
536 545Right-handed alpha
Helix 20
20
B
546 554Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2NRV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
375 384anti-parallel
Strand 3
A
394 399anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
375 384anti-parallel
Strand 3
A
362 371anti-parallel
Strand 4
A
425 429parallel
Strand 5
A
451 454parallel
Strand 6
A
461 463anti-parallel
Strand 7
A
466 468anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 388first strand
Strand 2
B
375 384anti-parallel
Strand 3
B
394 398anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 388first strand
Strand 2
B
375 384anti-parallel
Strand 3
B
362 371anti-parallel
Strand 4
B
425 429parallel
Strand 5
B
451 454parallel
Strand 6
B
460 463anti-parallel
Strand 7
B
466 469anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il