Analysis of interatomic Contacts of Structural Units in PDB entry:
2NV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NV0 entry

There are 2 chains in PDB entry 2NV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 195
B
 MET 1ALA 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2NV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
32 39Right-handed 310
Helix 3
3
A
48 59Right-handed alpha
Helix 4
4
A
61 71Right-handed alpha
Helix 5
5
A
79 86Right-handed alpha
Helix 6
6
A
177 194Right-handed alpha
Helix 7
7
B
12 23Right-handed alpha
Helix 8
8
B
32 39Right-handed 310
Helix 9
9
B
48 60Right-handed alpha
Helix 10
10
B
61 71Right-handed alpha
Helix 11
11
B
80 86Right-handed alpha
Helix 12
12
B
177 194Right-handed alpha
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There are 6 sheets in PDB entry 2NV0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
3 7parallel
Strand 3
A
41 44parallel
Strand 4
A
75 78parallel
Strand 5
A
164 167parallel
Strand 6
A
155 161anti-parallel
Strand 7
A
147 152anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 105first strand
Strand 2
A
138 142anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 120first strand
Strand 2
A
129 134anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
3 7parallel
Strand 3
B
41 44parallel
Strand 4
B
75 78parallel
Strand 5
B
164 167parallel
Strand 6
B
155 161anti-parallel
Strand 7
B
147 152anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 105first strand
Strand 2
B
138 142anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 120first strand
Strand 2
B
129 134anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il