Analysis of interatomic Contacts of Structural Units in PDB entry:
2NVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NVO entry

There is 1 chain in PDB entry 2NVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 36VAL 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2NVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 48Right-handed alpha
Helix 2
2
A
66 76Right-handed alpha
Helix 3
3
A
76 91Right-handed alpha
Helix 4
4
A
96 110Right-handed alpha
Helix 5
5
A
112 127Right-handed alpha
Helix 6
6
A
129 141Right-handed alpha
Helix 7
7
A
147 161Right-handed alpha
Helix 8
8
A
162 173Right-handed alpha
Helix 9
9
A
181 189Right-handed alpha
Helix 10
10
A
194 207Right-handed alpha
Helix 11
11
A
215 227Right-handed alpha
Helix 12
12
A
231 243Right-handed alpha
Helix 13
13
A
245 249Right-handed 310
Helix 14
14
A
250 254Right-handed 310
Helix 15
15
A
255 264Right-handed alpha
Helix 16
16
A
267 281Right-handed alpha
Helix 17
17
A
288 300Right-handed alpha
Helix 18
18
A
301 308Right-handed alpha
Helix 19
19
A
311 324Right-handed alpha
Helix 20
20
A
337 352Right-handed alpha
Helix 21
21
A
353 355Right-handed 310
Helix 22
22
A
369 374Right-handed 310
Helix 23
23
A
376 380Right-handed 310
Helix 24
24
A
384 400Right-handed alpha
Helix 25
25
A
422 430Right-handed alpha
Helix 26
26
A
441 450Right-handed alpha
Helix 27
27
A
471 484Right-handed alpha
Helix 28
28
A
518 528Right-handed alpha
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There are 2 sheets in PDB entry 2NVO. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
509 514parallel
Strand 3
A
488 493parallel
Strand 4
A
456 461parallel
Strand 5
A
361 366parallel
Strand 6
A
402 408parallel
Strand 7
A
412 414anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 176first strand
Strand 2
A
179 180anti-parallel
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