Analysis of interatomic Contacts of Structural Units in PDB entry:
2NWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NWB entry

There are 2 chains in PDB entry 2NWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5HIS 396
B
 TYR 6GLU 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2NWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 16Right-handed alpha
Helix 2
2
A
17 33Right-handed alpha
Helix 3
3
A
43 65Right-handed alpha
Helix 4
4
A
70 91Right-handed alpha
Helix 5
5
A
95 99Right-handed 310
Helix 6
6
A
104 119Right-handed alpha
Helix 7
7
A
125 130Right-handed alpha
Helix 8
8
A
146 172Right-handed alpha
Helix 9
9
A
181 206Right-handed alpha
Helix 10
10
A
209 217Right-handed alpha
Helix 11
11
A
218 221Right-handed 310
Helix 12
12
A
239 249Right-handed alpha
Helix 13
13
A
256 265Right-handed alpha
Helix 14
14
A
266 270Right-handed 310
Helix 15
15
A
271 282Right-handed alpha
Helix 16
16
A
286 294Right-handed alpha
Helix 17
17
A
295 298Right-handed 310
Helix 18
18
A
300 327Right-handed alpha
Helix 19
19
A
327 333Right-handed alpha
Helix 20
20
A
333 340Right-handed alpha
Helix 21
21
A
354 371Right-handed alpha
Helix 22
22
A
380 395Right-handed alpha
Helix 23
23
B
6 16Right-handed alpha
Helix 24
24
B
17 33Right-handed alpha
Helix 25
25
B
43 65Right-handed alpha
Helix 26
26
B
70 91Right-handed alpha
Helix 27
27
B
95 99Right-handed 310
Helix 28
28
B
104 119Right-handed alpha
Helix 29
29
B
125 130Right-handed alpha
Helix 30
30
B
146 172Right-handed alpha
Helix 31
31
B
181 206Right-handed alpha
Helix 32
32
B
209 217Right-handed alpha
Helix 33
33
B
218 221Right-handed 310
Helix 34
34
B
239 249Right-handed alpha
Helix 35
35
B
256 265Right-handed alpha
Helix 36
36
B
266 270Right-handed 310
Helix 37
37
B
271 282Right-handed alpha
Helix 38
38
B
286 294Right-handed alpha
Helix 39
39
B
295 298Right-handed 310
Helix 40
40
B
300 326Right-handed alpha
Helix 41
41
B
358 371Right-handed alpha
Helix 42
42
B
380 393Right-handed alpha
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There are 4 sheets in PDB entry 2NWB. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
139 140anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 226first strand
Strand 2
A
229 231anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
139 140anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 226first strand
Strand 2
B
229 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il