Analysis of interatomic Contacts of Structural Units in PDB entry:
2NWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NWH entry

There is 1 chain in PDB entry 2NWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2NWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 50Right-handed alpha
Helix 2
2
A
63 76Right-handed alpha
Helix 3
3
A
110 116Right-handed 310
Helix 4
4
A
117 122Right-handed alpha
Helix 5
5
A
123 133Right-handed alpha
Helix 6
6
A
143 157Right-handed alpha
Helix 7
7
A
167 172Right-handed alpha
Helix 8
8
A
173 175Right-handed 310
Helix 9
9
A
177 181Right-handed 310
Helix 10
10
A
188 196Right-handed alpha
Helix 11
11
A
204 212Right-handed alpha
Helix 12
12
A
252 265Right-handed alpha
Helix 13
13
A
268 285Right-handed alpha
Helix 14
14
A
290 294Right-handed 310
Helix 15
15
A
295 304Right-handed alpha
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There are 3 sheets in PDB entry 2NWH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
53 57parallel
Strand 3
A
3 7parallel
Strand 4
A
135 139parallel
Strand 5
A
161 164parallel
Strand 6
A
183 187parallel
Strand 7
A
217 221parallel
Strand 8
A
225 229anti-parallel
Strand 9
A
234 237anti-parallel
Strand 10
A
309 311anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 37first strand
Strand 2
A
11 18anti-parallel
Strand 3
A
92 97parallel
Strand 4
A
103 109anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
83 85parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il