Analysis of interatomic Contacts of Structural Units in PDB entry:
2NYN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NYN entry

There are 8 chains in PDB entry 2NYN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 25GLY 166
A
 ASP 170LEU 563
B
 ASN 25GLY 166
B
 ASP 170LEU 563
C
 ASN 25GLY 166
C
 ASP 170LEU 563
D
 ASN 25GLY 166
D
 ASP 170LEU 563
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 2NYN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 45Right-handed alpha
Helix 2
2
A
53 72Right-handed alpha
Helix 3
3
A
94 108Right-handed alpha
Helix 4
4
A
117 133Right-handed alpha
Helix 5
5
A
140 154Right-handed alpha
Helix 6
6
A
170 182Right-handed alpha
Helix 7
7
A
199 206Right-handed alpha
Helix 8
8
A
216 223Right-handed alpha
Helix 9
9
A
225 257Right-handed alpha
Helix 10
10
A
261 264Right-handed 310
Helix 11
11
A
265 271Right-handed alpha
Helix 12
12
A
274 289Right-handed alpha
Helix 13
13
A
313 318Right-handed alpha
Helix 14
14
A
318 342Right-handed alpha
Helix 15
15
A
352 355Right-handed 310
Helix 16
16
A
365 395Right-handed alpha
Helix 17
17
A
403 407Right-handed 310
Helix 18
18
A
418 436Right-handed alpha
Helix 19
19
A
439 443Right-handed 310
Helix 20
20
A
457 496Right-handed alpha
Helix 21
21
A
499 503Right-handed 310
Helix 22
22
A
505 520Right-handed alpha
Helix 23
23
A
532 536Right-handed 310
Helix 24
24
A
537 551Right-handed alpha
Helix 25
25
A
553 558Right-handed alpha
Helix 26
26
A
559 563Right-handed 310
Helix 27
27
B
34 45Right-handed alpha
Helix 28
28
B
53 73Right-handed alpha
Helix 29
29
B
94 108Right-handed alpha
Helix 30
30
B
117 133Right-handed alpha
Helix 31
31
B
140 154Right-handed alpha
Helix 32
32
B
170 183Right-handed alpha
Helix 33
33
B
199 206Right-handed alpha
Helix 34
34
B
216 223Right-handed alpha
Helix 35
35
B
225 257Right-handed alpha
Helix 36
36
B
261 264Right-handed 310
Helix 37
37
B
265 271Right-handed alpha
Helix 38
38
B
274 289Right-handed alpha
Helix 39
39
B
313 318Right-handed alpha
Helix 40
40
B
318 342Right-handed alpha
Helix 41
41
B
352 355Right-handed 310
Helix 42
42
B
365 395Right-handed alpha
Helix 43
43
B
403 407Right-handed 310
Helix 44
44
B
418 436Right-handed alpha
Helix 45
45
B
439 443Right-handed 310
Helix 46
46
B
446 451Right-handed alpha
Helix 47
47
B
457 496Right-handed alpha
Helix 48
48
B
499 503Right-handed 310
Helix 49
49
B
505 520Right-handed alpha
Helix 50
50
B
532 536Right-handed 310
Helix 51
51
B
537 551Right-handed alpha
Helix 52
52
B
553 558Right-handed alpha
Helix 53
53
C
34 45Right-handed alpha
Helix 54
54
C
53 73Right-handed alpha
Helix 55
55
C
93 108Right-handed alpha
Helix 56
56
C
117 133Right-handed alpha
Helix 57
57
C
140 154Right-handed alpha
Helix 58
58
C
170 183Right-handed alpha
Helix 59
59
C
199 206Right-handed alpha
Helix 60
60
C
216 223Right-handed alpha
Helix 61
61
C
225 257Right-handed alpha
Helix 62
62
C
261 264Right-handed 310
Helix 63
63
C
265 271Right-handed alpha
Helix 64
64
C
274 289Right-handed alpha
Helix 65
65
C
313 318Right-handed alpha
Helix 66
66
C
318 342Right-handed alpha
Helix 67
67
C
352 355Right-handed 310
Helix 68
68
C
365 395Right-handed alpha
Helix 69
69
C
403 407Right-handed 310
Helix 70
70
C
418 436Right-handed alpha
Helix 71
71
C
439 443Right-handed 310
Helix 72
72
C
457 496Right-handed alpha
Helix 73
73
C
499 503Right-handed 310
Helix 74
74
C
505 520Right-handed alpha
Helix 75
75
C
532 536Right-handed 310
Helix 76
76
C
537 552Right-handed alpha
Helix 77
77
C
553 558Right-handed alpha
Helix 78
78
D
34 45Right-handed alpha
Helix 79
79
D
53 73Right-handed alpha
Helix 80
80
D
94 108Right-handed alpha
Helix 81
81
D
117 133Right-handed alpha
Helix 82
82
D
140 154Right-handed alpha
Helix 83
83
D
170 183Right-handed alpha
Helix 84
84
D
199 206Right-handed alpha
Helix 85
85
D
216 223Right-handed alpha
Helix 86
86
D
225 257Right-handed alpha
Helix 87
87
D
261 264Right-handed 310
Helix 88
88
D
265 271Right-handed alpha
Helix 89
89
D
274 289Right-handed alpha
Helix 90
90
D
313 318Right-handed alpha
Helix 91
91
D
318 342Right-handed alpha
Helix 92
92
D
352 355Right-handed 310
Helix 93
93
D
365 395Right-handed alpha
Helix 94
94
D
403 407Right-handed 310
Helix 95
95
D
418 436Right-handed alpha
Helix 96
96
D
439 443Right-handed 310
Helix 97
97
D
457 496Right-handed alpha
Helix 98
98
D
499 503Right-handed 310
Helix 99
99
D
505 520Right-handed alpha
Helix 100
100
D
532 536Right-handed 310
Helix 101
101
D
537 551Right-handed alpha
Helix 102
102
D
553 558Right-handed alpha
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There are 16 sheets in PDB entry 2NYN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
48 50parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
160 162anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
189 192anti-parallel
Strand 3
A
195 198anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 351first strand
Strand 2
A
356 358anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 28first strand
Strand 2
B
48 50parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 115first strand
Strand 2
B
160 162anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 157first strand
Strand 2
B
189 192anti-parallel
Strand 3
B
195 198anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 351first strand
Strand 2
B
356 358anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 28first strand
Strand 2
C
48 50parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 115first strand
Strand 2
C
160 162anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 157first strand
Strand 2
C
189 192anti-parallel
Strand 3
C
195 198anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
349 351first strand
Strand 2
C
356 358anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 28first strand
Strand 2
D
48 50parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 115first strand
Strand 2
D
160 162anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
155 157first strand
Strand 2
D
189 192anti-parallel
Strand 3
D
195 198anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
349 351first strand
Strand 2
D
356 358anti-parallel
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