Analysis of interatomic Contacts of Structural Units in PDB entry:
2NZ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NZ2 entry

There is 1 chain in PDB entry 2NZ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4SER 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 2NZ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
43 55Right-handed alpha
Helix 3
3
A
64 72Right-handed alpha
Helix 4
4
A
72 79Right-handed alpha
Helix 5
5
A
82 86Right-handed 310
Helix 6
6
A
93 110Right-handed alpha
Helix 7
7
A
123 136Right-handed alpha
Helix 8
8
A
143 146Right-handed 310
Helix 9
9
A
147 152Right-handed alpha
Helix 10
10
A
157 167Right-handed alpha
Helix 11
11
A
192 197Right-handed 310
Helix 12
12
A
203 207Right-handed 310
Helix 13
13
A
246 262Right-handed alpha
Helix 14
14
A
284 302Right-handed alpha
Helix 15
15
A
303 324Right-handed alpha
Helix 16
16
A
328 342Right-handed alpha
Helix 17
17
A
371 376Right-handed alpha
Helix 18
18
A
384 405Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2NZ2. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
29 37parallel
Strand 3
A
5 10parallel
Strand 4
A
113 115parallel
Strand 5
A
140 142parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
188 190anti-parallel
Strand 3
A
277 283anti-parallel
Strand 4
A
265 271anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
231 237anti-parallel
Strand 3
A
221 228anti-parallel
Strand 4
A
347 354anti-parallel
Strand 5
A
357 364anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il