Analysis of interatomic Contacts of Structural Units in PDB entry:
2NZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NZ6 entry

There is 1 chain in PDB entry 2NZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -21TYR 1311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 2NZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-11 -2Right-handed alpha
Helix 2
2
A
1023 1048Right-handed alpha
Helix 3
3
A
1062 1069Right-handed 310
Helix 4
4
A
1089 1094Right-handed 310
Helix 5
5
A
1119 1130Right-handed alpha
Helix 6
6
A
1211 1226Right-handed alpha
Helix 7
7
A
1243 1262Right-handed alpha
Helix 8
8
A
1266 1276Right-handed alpha
Helix 9
9
A
1284 1303Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2NZ6. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1021 1022first strand
Strand 2
A
1264 1265anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1097 1100first strand
Strand 2
A
1109 1113anti-parallel
Strand 3
A
1235 1239parallel
Strand 4
A
1134 1138parallel
Strand 5
A
1192 1200parallel
Strand 6
A
1177 1186anti-parallel
Strand 7
A
1164 1173anti-parallel
Strand 8
A
1159 1161anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il