Analysis of interatomic Contacts of Structural Units in PDB entry:
2O0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O0B entry

There is 1 chain in PDB entry 2O0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2O0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 39Right-handed alpha
Helix 2
2
A
52 65Right-handed alpha
Helix 3
3
A
95 107Right-handed alpha
Helix 4
4
A
118 124Right-handed 310
Helix 5
5
A
126 136Right-handed alpha
Helix 6
6
A
168 178Right-handed alpha
Helix 7
7
A
179 181Right-handed 310
Helix 8
8
A
196 210Right-handed alpha
Helix 9
9
A
239 254Right-handed alpha
Helix 10
10
A
269 280Right-handed alpha
Helix 11
11
A
309 311Right-handed 310
Helix 12
12
A
312 322Right-handed alpha
Helix 13
13
A
334 340Right-handed 310
Helix 14
14
A
343 355Right-handed alpha
Helix 15
15
A
383 395Right-handed alpha
Helix 16
16
A
404 411Right-handed 310
Helix 17
17
A
414 424Right-handed alpha
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There are 6 sheets in PDB entry 2O0B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
400 402anti-parallel
Strand 3
A
376 378parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 17first strand
Strand 2
A
256 259parallel
Strand 3
A
290 294anti-parallel
Strand 4
A
283 287anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
76 79anti-parallel
Strand 3
A
44 47anti-parallel
Strand 4
A
234 235parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
112 116parallel
Strand 3
A
147 150anti-parallel
Strand 4
A
139 141anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
185 189parallel
Strand 3
A
221 224anti-parallel
Strand 4
A
214 215anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
328 332parallel
Strand 3
A
365 369anti-parallel
Strand 4
A
358 362anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il