Analysis of interatomic Contacts of Structural Units in PDB entry:
2O12


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O12 entry

There is 1 chain in PDB entry 2O12 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2O12. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 41Right-handed alpha
Helix 2
2
A
53 55Right-handed 310
Helix 3
3
A
81 86Right-handed alpha
Helix 4
4
A
95 101Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
116 125Right-handed alpha
Helix 7
7
A
129 137Right-handed alpha
Helix 8
8
A
139 160Right-handed alpha
Helix 9
9
A
182 184Right-handed 310
Helix 10
10
A
185 192Right-handed alpha
Helix 11
11
A
198 216Right-handed alpha
Helix 12
12
A
239 242Right-handed 310
Helix 13
13
A
243 254Right-handed alpha
Helix 14
14
A
265 270Right-handed alpha
Helix 15
15
A
271 272Right-handed 310
Helix 16
16
A
273 277Right-handed 310
Helix 17
17
A
346 371Right-handed alpha
Helix 18
18
A
374 391Right-handed alpha
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There are 6 sheets in PDB entry 2O12. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
14 20anti-parallel
Strand 3
A
73 78anti-parallel
Strand 4
A
57 61anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
67 68anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 170first strand
Strand 2
A
221 228anti-parallel
Strand 3
A
308 314anti-parallel
Strand 4
A
258 263anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
289 290anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
302 303anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
334 336anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il