Analysis of interatomic Contacts of Structural Units in PDB entry:
2O52


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O52 entry

There are 2 chains in PDB entry 2O52 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5MET 183
B
 SER 5ASP 174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 2O52. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 30Right-handed alpha
Helix 2
2
A
66 71Right-handed alpha
Helix 3
3
A
74 79Right-handed alpha
Helix 4
4
A
92 98Right-handed alpha
Helix 5
5
A
98 110Right-handed alpha
Helix 6
6
A
123 129Right-handed 310
Helix 7
7
A
132 143Right-handed alpha
Helix 8
8
A
157 175Right-handed alpha
Helix 9
9
A
179 183Right-handed 310
Helix 10
10
B
20 30Right-handed alpha
Helix 11
11
B
66 70Right-handed 310
Helix 12
12
B
74 79Right-handed alpha
Helix 13
13
B
92 98Right-handed alpha
Helix 14
14
B
98 110Right-handed alpha
Helix 15
15
B
122 129Right-handed 310
Helix 16
16
B
132 143Right-handed alpha
Helix 17
17
B
157 173Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2O52. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 52first strand
Strand 2
A
55 62anti-parallel
Strand 3
A
7 15parallel
Strand 4
A
83 89parallel
Strand 5
A
115 121parallel
Strand 6
A
146 150parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 52first strand
Strand 2
B
55 62anti-parallel
Strand 3
B
7 14parallel
Strand 4
B
83 89parallel
Strand 5
B
115 121parallel
Strand 6
B
146 149parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il