Analysis of interatomic Contacts of Structural Units in PDB entry:
2O5K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O5K entry

There is 1 chain in PDB entry 2O5K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ILE 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2O5K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
95 104Right-handed alpha
Helix 2
2
A
138 147Right-handed alpha
Helix 3
3
A
148 150Right-handed 310
Helix 4
4
A
154 175Right-handed alpha
Helix 5
5
A
183 185Right-handed 310
Helix 6
6
A
224 229Right-handed alpha
Helix 7
7
A
236 250Right-handed alpha
Helix 8
8
A
261 274Right-handed alpha
Helix 9
9
A
277 284Right-handed alpha
Helix 10
10
A
300 305Right-handed alpha
Helix 11
11
A
310 319Right-handed alpha
Helix 12
12
A
324 328Right-handed 310
Helix 13
13
A
330 336Right-handed alpha
Helix 14
14
A
337 339Right-handed 310
Helix 15
15
A
340 345Right-handed alpha
Helix 16
16
A
363 368Right-handed alpha
Helix 17
17
A
370 372Right-handed 310
Helix 18
18
A
373 378Right-handed alpha
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There are 3 sheets in PDB entry 2O5K. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
52 61anti-parallel
Strand 3
A
71 75anti-parallel
Strand 4
A
81 89anti-parallel
Strand 5
A
126 133anti-parallel
Strand 6
A
112 118anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
205 206anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 189first strand
Strand 2
A
196 198anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il