Analysis of interatomic Contacts of Structural Units in PDB entry:
2O5V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O5V entry

There is 1 chain in PDB entry 2O5V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ALA 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2O5V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 52Right-handed alpha
Helix 2
2
A
58 63Right-handed 310
Helix 3
3
A
104 108Right-handed 310
Helix 4
4
A
121 126Right-handed alpha
Helix 5
5
A
127 143Right-handed alpha
Helix 6
6
A
143 166Right-handed alpha
Helix 7
7
A
168 172Right-handed 310
Helix 8
8
A
175 208Right-handed alpha
Helix 9
9
A
226 234Right-handed alpha
Helix 10
10
A
234 242Right-handed alpha
Helix 11
11
A
247 251Right-handed 310
Helix 12
12
A
262 266Right-handed alpha
Helix 13
13
A
267 291Right-handed alpha
Helix 14
14
A
300 304Right-handed 310
Helix 15
15
A
306 320Right-handed alpha
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There are 3 sheets in PDB entry 2O5V. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
6 12anti-parallel
Strand 3
A
70 78anti-parallel
Strand 4
A
81 90anti-parallel
Strand 5
A
93 98anti-parallel
Strand 6
A
101 103anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 116first strand
Strand 2
A
295 298parallel
Strand 3
A
322 327parallel
Strand 4
A
27 32parallel
Strand 5
A
336 341parallel
Strand 6
A
344 347anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 219first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
260 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il