Analysis of interatomic Contacts of Structural Units in PDB entry:
2O6I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O6I entry

There are 2 chains in PDB entry 2O6I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 453
B
 SER -2VAL 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 2O6I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 7Right-handed 310
Helix 2
2
A
29 36Right-handed alpha
Helix 3
3
A
37 42Right-handed alpha
Helix 4
4
A
43 46Right-handed 310
Helix 5
5
A
50 55Right-handed 310
Helix 6
6
A
62 85Right-handed alpha
Helix 7
7
A
86 91Right-handed alpha
Helix 8
8
A
92 94Right-handed 310
Helix 9
9
A
96 98Right-handed 310
Helix 10
10
A
99 110Right-handed alpha
Helix 11
11
A
117 125Right-handed alpha
Helix 12
12
A
128 139Right-handed alpha
Helix 13
13
A
142 150Right-handed alpha
Helix 14
14
A
154 164Right-handed alpha
Helix 15
15
A
169 177Right-handed alpha
Helix 16
16
A
181 196Right-handed alpha
Helix 17
17
A
197 201Right-handed 310
Helix 18
18
A
203 210Right-handed alpha
Helix 19
19
A
224 242Right-handed alpha
Helix 20
20
A
245 267Right-handed alpha
Helix 21
21
A
280 286Right-handed alpha
Helix 22
22
A
289 295Right-handed alpha
Helix 23
23
A
297 308Right-handed alpha
Helix 24
24
A
313 325Right-handed alpha
Helix 25
25
A
340 355Right-handed alpha
Helix 26
26
A
357 362Right-handed alpha
Helix 27
27
A
398 402Right-handed alpha
Helix 28
28
A
402 410Right-handed alpha
Helix 29
29
A
421 426Right-handed 310
Helix 30
30
A
437 445Right-handed alpha
Helix 31
31
B
4 7Right-handed 310
Helix 32
32
B
29 37Right-handed alpha
Helix 33
33
B
37 42Right-handed alpha
Helix 34
34
B
43 46Right-handed 310
Helix 35
35
B
49 54Right-handed 310
Helix 36
36
B
62 86Right-handed alpha
Helix 37
37
B
86 91Right-handed alpha
Helix 38
38
B
92 94Right-handed 310
Helix 39
39
B
96 98Right-handed 310
Helix 40
40
B
99 110Right-handed alpha
Helix 41
41
B
117 125Right-handed alpha
Helix 42
42
B
128 139Right-handed alpha
Helix 43
43
B
142 152Right-handed alpha
Helix 44
44
B
154 164Right-handed alpha
Helix 45
45
B
169 177Right-handed alpha
Helix 46
46
B
181 196Right-handed alpha
Helix 47
47
B
197 201Right-handed 310
Helix 48
48
B
203 209Right-handed alpha
Helix 49
49
B
224 242Right-handed alpha
Helix 50
50
B
245 267Right-handed alpha
Helix 51
51
B
280 286Right-handed alpha
Helix 52
52
B
289 294Right-handed alpha
Helix 53
53
B
297 307Right-handed alpha
Helix 54
54
B
313 325Right-handed alpha
Helix 55
55
B
336 354Right-handed alpha
Helix 56
56
B
398 402Right-handed alpha
Helix 57
57
B
402 408Right-handed alpha
Helix 58
58
B
421 425Right-handed 310
Helix 59
59
B
437 445Right-handed alpha
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There are 6 sheets in PDB entry 2O6I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 18first strand
Strand 2
A
22 28anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
217 221anti-parallel
Strand 3
A
388 390parallel
Strand 4
A
395 397anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
416 420anti-parallel
Strand 3
A
363 366anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 18first strand
Strand 2
B
22 28anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 214first strand
Strand 2
B
217 221anti-parallel
Strand 3
B
388 390parallel
Strand 4
B
395 397anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 332first strand
Strand 2
B
418 420anti-parallel
Strand 3
B
363 364anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il