Analysis of interatomic Contacts of Structural Units in PDB entry:
2O7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O7V entry

There is 1 chain in PDB entry 2O7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 18VAL 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 2O7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 79Right-handed 310
Helix 2
2
A
101 116Right-handed alpha
Helix 3
3
A
133 148Right-handed alpha
Helix 4
4
A
151 157Right-handed alpha
Helix 5
5
A
169 185Right-handed alpha
Helix 6
6
A
185 190Right-handed alpha
Helix 7
7
A
210 216Right-handed alpha
Helix 8
8
A
223 235Right-handed alpha
Helix 9
9
A
255 265Right-handed alpha
Helix 10
10
A
278 292Right-handed alpha
Helix 11
11
A
307 311Right-handed 310
Helix 12
12
A
312 328Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2O7V. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
32 33anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 61first strand
Strand 2
A
66 73anti-parallel
Strand 3
A
118 123anti-parallel
Strand 4
A
83 89parallel
Strand 5
A
158 168parallel
Strand 6
A
194 200parallel
Strand 7
A
267 273parallel
Strand 8
A
295 301parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il